Manual for Laboratory Diagnosis of Anthrax

 

Model standard operating procedures


Model D Bacteriological Diagnosis of Anthrax

 

*     Objective

Isolation and confirmation of Bacillus anthracis from clinical material.

*     Processing of specimens

Handle all specimens as per guidelines provided in sections/SOP for biosafety measures (see 5.2, 5.5)

Vesicular fluid

*     Prepare two smears.

*     Stain one by Gram stain and other by polychrome methylene blue stain.

*     Follow the method and interpretation given in SOP C.

*     Inoculate vesicle fluid onto sheep blood agar (SBA) and nutrient broth (NB) using swab or Pasteur pipette.

*     Incubate plates at 37 °C for 18–24 hours.

*     Read the plates for colony characters:

*      

*     Examine NB for floccular deposit and surface pellicle and use this suspension for checking motility of the isolate either by hanging drop method or by any other reliable method.

Hanging drop preparation 15

B. anthracis is a non-motile organism. This characteristic is unusual among other Bacillus species.

 

*     Place a cover slip on a small piece of paper on the table inside the BSC.

*     Place a small drop of mineral oil in each corner of the cover slip.

*     Place a flat drop of the broth culture in the centre of the cover slip, taking care not to have contact with the oil.

*     Invert a cavity slide over the cover slip and press gently to allow the oil to spread and form a complete seal.

*     Turn the slide, so that the cover slip is on top.

*     Inspect the drop to be sure it is "hanging" freely.

*     Examine under the microscope, focussing first on the edge of the drop with low power and then switching to high power magnification.

*     Ensure proper light adjustment by using light reflected by the concave mirror, partially closing the iris diaphragm and lowering the condenser, so as to have dim but adequate light to clearly view the hanging drop.

*     Observe the motility:

*     Discard the slide and cover slip into 10 % hypochlorite solution.

A preliminary report on culture may be sent with presumptive diagnosis.

Examination of culture smears

*     Pick up a very small portion of the suspected colony with a sterile loop.

*     Mix on a slide with a loopful of sterile normal saline.

*     Spread out gently to form a thin smear.

*     Allow the smear to air dry and heat fix.

*     Stain with Gram stain and malachite green.

*     Observe spores.

Malachite green stain for spores 16

*     Dry the films and fix with minimal flaming.

*     Place the slide over a beaker of boiling water, resting it on the rim with the bacterial film uppermost.

*     When, within several seconds, large droplets have condensed on the underside of the slide, flood it with 5% aqueous solution of malachite green. Leave to act for one minute and let the water continue to boil.

*     Wash in cold water.

*     Treat with 0.5% safranine or 0.05% basic fuchsin for 30 seconds.

*     Wash and dry.

This method colours the spores green and the vegetative bacilli red.

Modified Ziehl-Neelsen stain for spores 16

*     Air dry and heat fix the smear.

*     Cover the smear with carbol fuchsin.

*     Heat for 3-5 minutes.

*     Do not allow the stain to boil.

*     Wash with water.

*     Decolourize with alcohol.

*     Wash with water.

*     Counterstain with methylene blue.

*     Wash with water.

*     Dry in air.

*     Observe under oil immersion.

Spores will be stained red and vegetative forms blue.

Special tests

Induction of capsule formation 17

In blood

*     Transfer a pinhead quantity of growth from a suspect colony to 2.5 ml defibrinated sheep or horse blood in a sterile test tube or small bottle.

*     Incubate 5–18 hours at 37 oC.

*     Transfer a drop with a 1 m l loop immersed to the bottom of the unshaken bottle or tube to a microscope slide and make a thin smear.

*     Stain and examine as described in SOP C.

On bicarbonate agar plates

*     Plate the suspect colony onto bicarbonate/serum agar.

*     Incubate overnight at 37 °C under a 10–20% CO2 atmosphere .

*     Make smears, stain and examine as described in SOP C. Although the capsule stains well when produced by this method, it does not appear so well circumscribed as when produced in vivo or in blood as described above.

Susceptibility to penicillin G

*     Inoculate the organisms to be tested in 1.5 ml nutrient broth.

*     Incubate for two hours at 37 ° C.

*     Adjust the turbidity to Mc’Farland’s 0.5 standard.

*     The organism is inoculated on the entire surface of a Mueller Hinton agar/blood agar plate with a sterile swab.

*     Let the inoculum dry for a period not exceeding 15 minutes.

*     Place a penicillin G 10 units disc over it.

*     Press the disc gently to ensure even contact with the medium.

*     Use B. cereus as penicillin-resistant control and Staphylococcus aureus ATCC as penicillin-sensitive strain.

*     Incubate the plate for 18 hours at 37 ° C.

*     Measure the zone of inhibition around the disc.

Susceptibility to penicillin is indicated by a zone of inhibition of growth (³ 29mm) around the disc.

Diagnostic gamma bacteriophage test

*     Inoculate a blood agar plate evenly over its entire surface with a loopful of the test culture.

*     Place a loopful or a small drop (10–15 m l) of phage suspension in the center of the plate.

*     Allow to dry (do not spread).

*     Incubate at 37 ° C for 6 hours to overnight.

*     Observe for phage-induced bacterial lysis indicated by area of no growth.

*     Include a culture of B. anthracis as a positive control (the Sterne strain will do).

CSF/ascitic fluid

*     Do macroscopic examination.

*     Do not centrifuge the fluids, as they are almost always haemorrhagic.

*     Proceed with smear and culture as described in SOP D.3.1

Suggested procedure for isolation and identifictaion of B. anthracis and confirmation of diagnosis

 

 

 

 

Suggested procedure for isolation and identification of B. anthracis and confirmation of isolate from environmental material

 

 

Blood sample

*     Incubate the inoculated blood culture bottle at 37 ° C.

*     Examine the bottle after 18–24 hours incubation.

*     Observe the growth as indicated by turbidity.

*     With a sterile syringe and needle aspirate the broth (do not open the bottle) and make smears.

*     Stain smears as described in SOP C.

If the smear is suggestive of B. anthracis, subculture on blood agar medium and proceed with identification as described in SOP D.3.1.

*     If there is no growth in the broth, mix the broth gently and reincubate the bottle for three days.

*     When growth occurs proceed with subculture and identification as in D.3.1.

 

*     Safety measures

 

*     Perform all procedures in appropriate containment facility.

*     Seal the plates and tubes before incubation.

*     Discard the plates/tubes after appropriate disinfection/autoclave into autcclave bags. Autoclave and incinerate as in SOP A.3.1.

*     Dispose of as infectious waste as in SOP A.3.1.

 

*     Quality control

 

Media are supplied by the manufacturers for use only after vigorous quality checking of their products. Still, all batches of media prepared, whether from dehydrated materials or from ingredients should be subjected to quality control for sterility and performance before use.

 

 

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